I don't know which comment that you are referring to but it is incorrect. I personally confirmed with the project lead that they have no intention of "discontinuing open development."
Growl remains free-as-in-speech and free-as-in-beer if you're willing to compile it yourself. The $2 fee only applies if you obtain the app through the Mac App Store, of which a mere $1.39 goes to the project's developers.
So where is the code of 1.3.1? Even when it will be released once, why not immediately? With 'open development', I also really mean open development, as in other open source projects.
Anyway, as others said, this is still not an option, it still should be free. For example, in my own free and open applications which depends on Growl, I would distribute a free copy of Growl now because I want my users to be able to use it for free. And that goes for most Growl-using applications.
Growl remains free-as-in-speech and free-as-in-beer if you're willing to compile it yourself. The $2 fee only applies if you obtain the app through the Mac App Store, of which a mere $1.39 goes to the project's developers.